check out hardware stores for the multi-drawer units usually used for nails and such. they come in many sizes. some are small enough for findings and bobbins or cards of threads, some are long enough for tubes or even tools. some can be hung on the wall.
i have gone from snap lid boxes for my tubes of beads to stacked drawers long enough to accommodate the long tubes seed beads come in. each drawer holds a lot of tubes, and i can sort by color families and bead type and size.
i have a couple of tackle type boxes i take to classes, and i keep extra needles, nymo, scissors, mat, etc., in them all the time so that the only things i have to worry about putting in are the items i need for the class.
best feature to look for in a tote: a lid that stays on!
remember, shoe boxes are handy and cheap. refrigerator storage containers, new or washed, are good. anything that fits under the bed, or the sofa, or the chair, or on the floor of the closet is useful.
happy beading!